Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRASFVEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRALKGLEVEGIFTHLSNADSNIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRIQVAINNQLAPLIGKVCMDQCFVKLN-DIEAKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
| 4LUS Chain:B ((8-371)) | -----TWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVARTAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHVKIDS-----GFQPNEESVQEIIELNKLEYIDLEGMFTHFATADE---EYTYKQANNYKFMSDKLDEAGVKIAIKHVSNSAAIMD-C---PDLRLNMVRAGIILYGHYPSDDVFKDRLE-LRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKNP-KVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVT---AERIAKDLGTINYEVLCMISRRVDRVYM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258817 for 2978 contacts (-86.9/contact) +
2D Compatibility (PS) -37943 + (NN) -4830 + (LL) 1476
1D Compatibility (HY) -29600 + (ID) 6400
Total energy: -336114.0 ( -112.87 by residue)
QMean score : 0.570
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