Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEVLKKEMLELEKLALELENLVENEVKNIKETQQIIFKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYAEVLTSGDMITCPYCGRILYAESTHESNAQPPKESQPKESQEESQEESQEESQESV
3NA7 Chain:A ((1-237))
LGSNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYAEGA--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19615 for 1505 contacts (-13.0/contact) +
2D Compatibility (PS) -26291 + (NN) -20510 + (LL) 1572
1D Compatibility (HY) -28000 + (ID) 11350
Total energy: -104194.0 ( -69.23 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_3NA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NA7-query.scw
PDB file :
Tito_Scwrl_3NA7.pdb
: