Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKAKLGKNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
2EFN Chain:A ((58-78))
---------SLNLDYIVITSVKAKYGKNYHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTR
General information:
TITO was launched using:
RESULT:
Template:
2EFN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1098 for 53 contacts (-20.7/contact) +
2D Compatibility (PS) -2201 + (NN) 1205 + (LL) 1020
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -3524.0 ( -66.49 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_2EFN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EFN-query.scw
PDB file :
Tito_Scwrl_2EFN.pdb
: