Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLQQIDELENKFEEQEEQAQDTPLKQEPSTKEVKIPKKRGRKKSLLDEDKKKSFNIAFSPCVIKELNEFLLEFGSFKETRSTFIEEALIRHLKHRKNTQEQKLLKQLERLQNKEKGIMKTMNLNEFFTHKIIYKDTPLKFKDTLEQEISQASLVEKLILANILANMVFAKISNENAPKILISRLMCKFSPIDYESTIPSDFKPIDEEEYEDDLEWLNEEKEDRLFNYYLFLNGIKESDVEEVFNESVEIYDECLIEIAQNVLKDKFSYDIDLLQVLVKGYAKEIREFLSYKPIKEIKDFKDKDTALYISLGKDYDKEKEPFSKKLQQCFKEILESKGI |
| 2WVF Chain:A ((9-54)) | --------------------------------------------------SIIRFSVSLQQNLLDELDNRIIKNGY--SSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDGGQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKAS--------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11694 for 200 contacts (-58.5/contact) +
2D Compatibility (PS) -5039 + (NN) -2871 + (LL) 15840
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -7314.0 ( -36.57 by residue)
QMean score : 0.624
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