Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNEEMQVLLLMINNKKGNLRPSHKEFLQECLIEAVLHNKNINKTTEYAIRNNIAHLPINKTEGF--LVRTYNHSLGIFNENIAEKLKIPKKEKEILQPLNANEKQVLNTALENNEIDARTFKPWDLGSKEASKENASMSEELTQNNSKLSHFNENSIAQNSVGQNNVKEPNTKSNNSKQNHSLSNSDLTSNTDYNKLVADMFENQMDANGNYIGKKFSTQAYDNKTPYKVATGNASEYSSYLYSKKTKSKDIGMER |
| 1VIS Chain:A ((166-253)) | --------ILEIKNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKTAE--LVNEVAKIE-NKDEIFKEIDKVIDEALKIKNKEDFGKLM--TKNHELLKKLNISTPKLDRIVDIGNRFGFGAKLTGAGGGGCVIILVNEEKEKELLKELNKEDVRIFNCRMMNE---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3615 for 409 contacts (8.8/contact) +
2D Compatibility (PS) -9234 + (NN) 221 + (LL) 5000
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -7848.0 ( -19.19 by residue)
QMean score : 0.318
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