Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSISRRSILKKIPIALASTNVLKAVGVFEKVKSIPHATHFGPFIAKVQNGVIKDIVPQKSDYNPTMMLKAMADRVYSDSRVKYPCVRKSFLENKKN-HKELRGREEFVRVSWDMALDLAAKKLKEIPK----ENIFNASYGGWGHAGSLHRCNNLAWRFFNTTLGGAIGTDGEYSNGAAARINPMIVGDMEVYSQQTTHEEMIKNCKVYVMWGADLFKCNRIDYFVPNHVNDSYYPKYKRAGIKFISIDPIYTETAQAFNAEWIPIRPNTDVALMLGMMHHLYTSNQYDKAFIAKYTDGFDRFLPYLLGESDKAPKTLEWASQITGVSAEKIKELADLFVSKRTFLAGNWAMQRAQHGEQPDWALIVLASMIGQVGLSGGGFGFSMHYGGNAQASSGARVVPMISQGNNAVK--SVIPASRVSEAILNPDKEIDFKGKKLKLPKIKMIYNCGANLLGHEADTNELIRALRTLDCVIVHEPWWTPTAKFADIIFASTSTMERDDITFGGSYSKNVVYAMRKVVEPVYESKDDYEIFRQLALRVGGNETEQRFTESKSYMEWIKGLYE------KSDGHTLKSFDQFWRDGFVEFEIPENARKFVPHAKFRQDPINNKVDTESGKIQIFFQKCADFKLADFKGHPTWFEPAEWLGSKMAEIYPFHLISPHPKYCVNSQLDNTWVRTTYKIQGRGPVMITELDANKLGIRHGEIVEVFNARGRLLAGAFVTKNIRQGVLSIQEGAWYDPEDVNTRNPRCNAGSVNTLTSSRPTSSMTQAISVNTALVNIRRLRKYELVKPYHSISTPSIIGA |
1E5V Chain:A ((49-805)) | --------------------------------TVMSGSHWGVFTATVENGRATAFTPWEKDPHPSPMLAGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVSWDQALDLVAAEVKRVEETYGPEGVFGGSYG-WKSPGRLHNCTTLLRRML-TLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTAWPVLAENTEVMVFWAADPIKTSQIGWVIPEHGAYPGLEALKAKGTKVIVIDPVRTKTVEFFGAEHITPKPQTDVAIMLGMAHTLVAEDLYDKDFIANYTSGFDKFLPYLDGETDSTPKTAEWAEGISGVPAETIKELARLFESKRTMLAAGWSMQRMHHGEQAHWMLVTLASMLGQIGLPGGGFGLSYHYSGGGTPSTSGPALAGITDG-----GASVIPVARVVDMLENPGAEFDFNGTRSKFPDVKMAYWVGGNPFVHHQDRNRMVKAWEKLETFVVHDFQWTPTARHADIVLPATTSYERNDIETIGDYSNTGILAMKKIVEPLYEARSDYDIFAAVAERLGKG---AEFTEGKDEMGWIKSFYDDAAKQGKAAGVQMPAFDAFWAEGIVEFPVTDGA-DFVRYASFREDPLLNPLGTPTGLIEIYSKNIEKMGYDDCPAHPTWMEPLERLDGPGAK-YPLHIAASHPFNRLHSQLNGTVLREGYAVQGHEPCLMHPDDAAARGIADGDVVRVHNDRGQILTGVKVTDAVMKGVIQIYEGGWYDPSDVTEPGTLDKYGDVNVLSADIGTSKLAQGNCGQTVLAEVEKYTGPAVTLTGFVAPKAAE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -344950 for 6843 contacts (-50.4/contact) +
2D Compatibility (PS) -78845 + (NN) -30483 + (LL) 3948
1D Compatibility (HY) -58400 + (ID) 16250
Total energy: -524980.0 ( -76.72 by residue)
QMean score : 0.530
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