Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGPYEHHS-----NEVSWREGLCEVVRIPLNEHGLLDLEILEQTLKKTPN-SLVSVSAASNVTGILTPLKEVSSLCKEYRAILALDLANFSAHANPKDCEYQ---TGFYAPHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKD-LPAINIYGNLTASRV-GVVAFNIGGISPYDLARVLSYEYAIETRAGCSC-AGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR----- |
| 4ISY Chain:A ((12-398)) | --------------------------------SAYLDHAATTPMHPAAIEAMAAVQRTIGNASSLH-TSGRSARRRIEEARELIADKLGARPSEVIFTAG-------GTESDNLAVKGIYWARRDAEPHRR-----RIVTTEVEHHAVLDSVNWLVEHEG-AHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSD-AIQAVGQLPLDFGASGLSAMSVAGHK-FGGPPGVGALLLRRD---VTCVPLMHGGG-------------QERDIR--SGTPDVASAVGMATAAQIAVD-GLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDAN-------GIECSTGSPSHVLIAMGVDAASA----RGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202043 for 3184 contacts (-63.5/contact) +
2D Compatibility (PS) -40137 + (NN) -26337 + (LL) 6492
1D Compatibility (HY) -3200 + (ID) 4700
Total energy: -269925.0 ( -84.78 by residue)
QMean score : 0.479
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