Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSQALNKAKKELSPKGFRGGLESEILLGFVLQKERVFLHTHEHLELSHEEETRFFELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALNIISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPKALEVALKNIERFCLKERVFLKQTRLWDHM----PTIEMLVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIP-FLVCEMGYDQLKSLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR |
| 1NV8 Chain:A ((14-283)) | RKIWSLIRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLK-DLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRY--DTSGKIVLMEIGEDQVEELKKIVSD----TVFLKDSAGKYRFLLLNRRSS-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -137992 for 2098 contacts (-65.8/contact) +
2D Compatibility (PS) -28073 + (NN) -11635 + (LL) 440
1D Compatibility (HY) -21200 + (ID) 4750
Total energy: -203210.0 ( -96.86 by residue)
QMean score : 0.484
|
|
|