Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLINEKLNNLENSATKSPKEAVVLLNMGGPNSLYEVGVFLKNMFDDPFILTIKNNFMRKMVGKMIVNSRIEKSKKIYEKLGGKSPLTPITF----ALTERLNELDPS---RFYTYAMRYTPPYASMVLQDLALKEIESLVFFSMYPQYSSTTTLSSFNDAF---NALKSLETFRPKVRVIERFYADKKLNEIILNTILSALNNC---KSQDFVLIFSVHGLPKSIVDAGDTYQQECEHHVSLLKELMQQKNIPFKEVLLSYQSKLGPMKWLEPSTEE----LIEKHRKSNIIIYPLAFTIDNSETLYELDMQY-RLMAERLAVKEYLVCPCLNDSIEFAKFIIELVKNLKSE
2QD1 Chain:A ((1-323))----------------RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP---IQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTM--KWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCN-PYR---LVWQSKVGPMPWLGPQTDESIKGLCERGRK-NILLVPIAFTSDHIKTLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQS


General information:
TITO was launched using:
RESULT:

Template: 2QD1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173588 for 2491 contacts (-69.7/contact) +
2D Compatibility (PS) -32679 + (NN) -13945 + (LL) 1560
1D Compatibility (HY) -25200 + (ID) 5450
Total energy: -249302.0 ( -100.08 by residue)
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_2QD1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QD1-query.scw
PDB file : Tito_Scwrl_2QD1.pdb: