Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQYFTKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPKD-----RRIGIDIEPKRD------GFIQCDFLNYKLPVHQKVICLGNPPFGHRG----------------------------VMALEFINHAR----NCDFVCFILPMFFES-QGKGSIKYRVK-GLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
| 2IH2 Chain:A ((21-213)) | -----------------------------VETPPEVVDFMVSLAEAP-------RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK-TSVYYLG-EVFP-----QKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117338 for 1101 contacts (-106.6/contact) +
2D Compatibility (PS) -15728 + (NN) -3317 + (LL) 2344
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -140189.0 ( -127.33 by residue)
QMean score : 0.455
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