Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSIKNHLMCEEIHKRFNLHPKVREAMESIEREVFVPAPFKHFAYTLNALSMQAQQYISSPLTVAKMTQYLEIDHVDSVLEIGCGSGYQAAVLSQIFRRVFSIERIESLYIEARLRLKTLGLDNVHVKFADGNKGWERYAPYDRILFSACAKNIPQALIDQLEEGGILVAPIQENNEQVIKRFVKQNNALRVQKVLEKCLFVPVVDGVQ
3LBF Chain:B ((24-207))
---------------------QVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEH-QYLKRVRRRGGEFIIDTV-EAVRFVPLVKGEL
General information:
TITO was launched using:
RESULT:
Template:
3LBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121276 for 1521 contacts (-79.7/contact) +
2D Compatibility (PS) -19888 + (NN) -3839 + (LL) 1804
1D Compatibility (HY) -17600 + (ID) 4000
Total energy: -164799.0 ( -108.35 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_3LBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LBF-query.scw
PDB file :
Tito_Scwrl_3LBF.pdb
: