Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALLFTGACGYIGSHTARVFLEKTKENIIIIDDLSTGFLEHIKALERYYPNRVAFIQANLNETQKLDAFLNKQQLKDPIEAVLHFGAKISVEESMRLPLEYYTNNTLNTLGLVKLCLKHAIKRFIFSSTAVVYGES-GSSLSEESPLNPINPYGASKMMSERILLDASKVADFKCVILRYFNVAGACMHNDYTTPYTLGQRTLNATHLIKIACECAVGKRKKMGIFGTNYPTRDGTCIRDYIHVDDLANAHLASYHTLLEKNKSEIYNVGYNQGHSVKEVIEKVKEISNKDFLVEILDKRQGDPASLIANNSKILQNTPFKPLYNNLDTIIKSALSWEEHLLKFQ |
| 2C20 Chain:A ((2-326)) | NSILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGH-EDA------ITEGAKFYNGDLRDKAFLRDV---FTQE-NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNG------IIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -216326 for 2834 contacts (-76.3/contact) +
2D Compatibility (PS) -35126 + (NN) -14511 + (LL) 1076
1D Compatibility (HY) -23200 + (ID) 6100
Total energy: -294187.0 ( -103.81 by residue)
QMean score : 0.522
|
|
|