Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MQDKIIEILQISPIVPVVVVENIKDAVPLAQSLIEGGIPIIEVTLRSNCALEAIELIAKNVPKMRVGAGTILNLTQLEQAQNRGAEFLISPGLTIKLLEHAKKKDMPLIPGVSSSSEVMQALELGYNALKFFPAEYCGGVKLLNAFNGPFKGVKFCPTGGISADNMRSYLALENVVCVGGSWLTPKDLIQNKEWDKITEICKRALALR--
1FQ0 Chain:A ((1-213))
MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL
General information:
TITO was launched using:
RESULT:
Template:
1FQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183993 for 1807 contacts (-101.8/contact) +
2D Compatibility (PS) -23145 + (NN) -17000 + (LL) 0
1D Compatibility (HY) -21600 + (ID) 5150
Total energy: -250888.0 ( -138.84 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_1FQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FQ0-query.scw
PDB file :
Tito_Scwrl_1FQ0.pdb
: