Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLKKSLCALLISGFFIPPLMKAASFVYDLKFMSFNFNLASPPNNPYWNSLTKMQGRLMPQIGVQLDKRQALMFGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWFEGVVDWYGGRNWNNQPKKKNYDFDQFLYFVSSEFQFLKGYLGLGGQLVIFHNANSHSMGDNYPYGGNSYLKPGDATPQWPNGYPYFSQKDNPQGGEIGKYSNP--TILDRVYYHAYLKADFKN--LMPYMDNIFMTFGTQSS--QTHYCVRYASECKNARFYNSFGGEFYAQAQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGLYYLYKN--KWLSVRADAFFSF-VGGGDGYHLYGKGGKWFVMYQQFLTLTIDTRELIDFVKSKIPK |
| 1OPL Chain:A ((115-305)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGEWCEAQTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR----FNTL----AELVHHHSTVADGLITTL-HYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56801 for 1093 contacts (-52.0/contact) +
2D Compatibility (PS) -18775 + (NN) -778 + (LL) 12516
1D Compatibility (HY) -2400 + (ID) 2400
Total energy: -68638.0 ( -62.80 by residue)
QMean score : 0.100
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