Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVLHSHLENALNQLKELIDLTERDIRDIKLAKHAEIFERNHQKQLAIQAFEQEKTNIDAQMLSLKNQFPNKEMSELL----DEKTSDFLNQMREFLLVLKEKNLIYSRMAF---AVSEFYSSLIQQIIPHDTCDYKGSRHVGSHFLRVQA
2AZ4 Chain:A ((302-397))
-------------------------------AESGKIPELNPALEIPYDTLLKDKTDYLWQVV---NQFDNLQEGSLYIHSDAQPLGDFDPQYRVFLDLLAKKDITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLENPYGER
General information:
TITO was launched using:
RESULT:
Template:
2AZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3897 for 391 contacts (-10.0/contact) +
2D Compatibility (PS) -9099 + (NN) -3282 + (LL) 3276
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -21552.0 ( -55.12 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_2AZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AZ4-query.scw
PDB file :
Tito_Scwrl_2AZ4.pdb
: