Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKSAIFVLSGFLAFLLYALLLYGLLLERHNKEAEKILLDLNKKDEQAIDLNLEDLPSEKKNEKIEKVTEKQGDFLEPKEEPKEEPEESLEDIFSSLNDFQEKTDKNAQKDEQKNEQEEQRRLREQQRLKQNQENQEMLKGLQQNLNQFTQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWRGVFYH-K-ASVSVLIMITKDGEF-DYTILSYSDFKDYNKSVMTLLDDLKKVDFPPYPGG-------NMISIKVNFTTKEEQ |
| 1LR0 Chain:A ((21-120)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVGSEVTGSLDDLIVNLVSQQWRRPPSARNGMSVEVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVRNVG--RIPEMQQLPRATFDSLYRQRRIIFKPEDLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63455 for 619 contacts (-102.5/contact) +
2D Compatibility (PS) -10120 + (NN) -7783 + (LL) 12812
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -72546.0 ( -117.20 by residue)
QMean score : 0.627
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