Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDLKVISKHYAKALKNHTKSDLALLEEIVVGLKNLAEAIKLHKLNQVL--AHVSLKVKKEVVLEILEKITPTKACSILKPVMEVVLKNNRLDMLELVAEELSF---DSKRTLEATLLVPQKLENNELEEVQQKLQARFNAPVEIAQDTWSKKGVSLSVSSLDLEIGFSKEDILKKIEKQVIQSI
1ABV Chain:A ((2-105))
--EFITVARPYAKAAFDFAVEH-QSVERWQDMLAFAAEVTKNEQMAELLSGALAP-ETLAESFIAVCGEQLDENGQNLI----RVMAENGRLNALPDVLEQFIHLRAVSEAT-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ABV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54846 for 727 contacts (-75.4/contact) +
2D Compatibility (PS) -10200 + (NN) -5667 + (LL) 7340
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -66023.0 ( -90.82 by residue)
QMean score : 0.724
(partial model without unconserved sides chains):
PDB file :
Tito_1ABV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ABV-query.scw
PDB file :
Tito_Scwrl_1ABV.pdb
: