Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRKIFSEDSLEELAQSIKEHGLLQPVLVVSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLEEEKQELILNSIIGQKLSVRQTEDLARDFKINANFDNKKHGFKQTQTLIAEDELERFNQSLWDRYKLKAALKGKKIVLRCYKNSLLEAFMKKMMS |
| 4UMK Chain:C ((35-227)) | ----------------------------------ELGIDEVMPNPYQPRKVFSEDSLEELAQSIKEHGLLQPVLVVSENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLDGEKQELILNSIIGQKLSVRQTEDLARDFKIN--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46432 for 1258 contacts (-36.9/contact) +
2D Compatibility (PS) -19972 + (NN) -4442 + (LL) 7880
1D Compatibility (HY) -26800 + (ID) 9500
Total energy: -99266.0 ( -78.91 by residue)
QMean score : 0.398
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