Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHLDRQSLEKAKHLIQSGLIDTIEVGAIKGLQEIHRFLFEGLYEFAGKIRDKNIS--NFRFANCLYLDLILPRMESMPQNNFNQIIEKYVEMNIAHPFLEGNGRATRIWLDLLLKKELKKIALWDRIDKAAYLSAIKRSPVNDLEIKTLLKKHLSSNINDSLTFIKGITQSYYYEGL
2F6S Chain:A ((24-199))
-HLDRQSLEKAKHLIQSGLIDTIEVGTIKGLQEIHRFLFEGLYEFAGKIRDKNIAKGNFRFANCLYLDLILPRIESMPQNNFNQIVEKYVEMNIAHPFLEGNGRATRIWLDLLLKKELKKIVLWDRIDKAAYLSAMERSPVNDLEIKTLLKKHLSSNTNDPLTLIKGITQSYYYEGL
General information:
TITO was launched using:
RESULT:
Template:
2F6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81109 for 1315 contacts (-61.7/contact) +
2D Compatibility (PS) -18601 + (NN) -7685 + (LL) 208
1D Compatibility (HY) -26400 + (ID) 8200
Total energy: -141787.0 ( -107.82 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_2F6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F6S-query.scw
PDB file :
Tito_Scwrl_2F6S.pdb
: