Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLEIDNQTPLESDFLLLEKIADVLAST----QIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAI--PHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDKGEQRQKEGELIKAFDLPLSLIERTQEC
1OZ9 Chain:A ((8-148))
KNRVLVKLKKRKVRKDKIEKWAELALSALGLNNVELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMGEEFGGYKILGDVVISQDTAERQARELGHSLEEEVKRLIVHGIVHLLGYDHEKGG----EEEKKFRELENYVLSKLSK----
General information:
TITO was launched using:
RESULT:
Template:
1OZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73408 for 989 contacts (-74.2/contact) +
2D Compatibility (PS) -14822 + (NN) -10746 + (LL) 484
1D Compatibility (HY) -6400 + (ID) 2150
Total energy: -107042.0 ( -108.23 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_1OZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OZ9-query.scw
PDB file :
Tito_Scwrl_1OZ9.pdb
: