Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLIRKERKKVVKKTKSPALVECPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTSKFEVISYIPGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVNKRTVSRSKYGTKKAKATDKKATDNKKK
4KHP Chain:L ((1-122))
-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEAA---------
General information:
TITO was launched using:
RESULT:
Template:
4KHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19142 for 807 contacts (-23.7/contact) +
2D Compatibility (PS) -13087 + (NN) -2817 + (LL) 496
1D Compatibility (HY) -9600 + (ID) 4700
Total energy: -48850.0 ( -60.53 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4KHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KHP-query.scw
PDB file :
Tito_Scwrl_4KHP.pdb
: