Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLALFFLALAGVAFAHDGGMGGMDMIKSYSIL--GAMIGLG---IAAFGGAIGMGNAAAATITGTARNPGVGGKLLTTMFVAMAMIEAQVIYTLVFAIIAIYSNPFLS
3ZK1 Chain:Q ((1-86))
------------------------MDLLTAKTIVLGCSAVGAGLAMIAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALILLYANPFLS
General information:
TITO was launched using:
RESULT:
Template:
3ZK1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28875 for 431 contacts (-67.0/contact) +
2D Compatibility (PS) -8448 + (NN) -3589 + (LL) 1732
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -48430.0 ( -112.37 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK1-query.scw
PDB file :
Tito_Scwrl_3ZK1.pdb
: