Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREIVWVHSQRIAPYKTLILNELHYYPLESDLTPFNALIFTSKNAVFSLLETLNNSPKLKMLQNIPAYALSEPTAKTLQDHHFKTAFIGKKAHGKEFAKEILPLLEKKSVLYLRAKEIASSLDTILLEHGINLQQAVVYENKLKHLTLSEQNALKPQEKSVLIFTAISHAKAFLHYFEFLKSYTAISIGNTTAHYLQEQGIQSYTAQKPSLESCLELALNLKS
3P9Z Chain:A ((5-225))
-REIVWVHSQRIAPYKTLILNEFCYYPLELDPTPFNALIFTSKNAVFSLLETLKNSPKLKMLQNIPAYALSEPTAKTLQDHHFKVAFMGE---------EIFPLLEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVYENKLKHLTLSEQNALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIPSYIAKKPSLEACLELALSLR-
General information:
TITO was launched using:
RESULT:
Template:
3P9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180301 for 1608 contacts (-112.1/contact) +
2D Compatibility (PS) -22415 + (NN) -1919 + (LL) 768
1D Compatibility (HY) -30800 + (ID) 9400
Total energy: -244067.0 ( -151.78 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_3P9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9Z-query.scw
PDB file :
Tito_Scwrl_3P9Z.pdb
: