Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVFKILSLWLGVFCFLRATPYLYLGEEPKYKDNFTHFEYANPNARKGGVLRNDAIGTFDSLNPFALKG--TKAEGL-------DLIYDTLMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTLDKRARFSNNAPILASDVKFSFDTIMKLGSPLYRQYYQDVKKAVILDKHHVKFIFKTTENKELP-LILGQLQIFSKKAFQKDYFEKNPLLIPVSSGPYVIASFDVGKKITYQRNPNYWAKNLPSRKGQFNFDQIKFEYYKDETVALQAFLSGAYDWRLESTAKVWARGYVGKAMDNKKITKYLIAHKMPSGMQGFFFNTRREIFKDKRVREALFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPS-PEEKALLAPYEKSLDERVFKEPYIVPRTDGPDVLGYNLRENLKYAQKLLESAGFSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDMIVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDDLIEKIINAKDYKEQLAAIQAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPEISPSYGFSPYLWWIKKERGPK |
4ONY Chain:A ((30-591)) | --------------------------------DYTHFPYTNPDAPKKGSLTVGVVGTFDSLNPFVLKSMRTTARGLYNDGEFGNMVYQTLMLRSRDEPFTLYSLLAEKVAIDPERKWVEFTLNPKAKWSDGQPVTVDDVLFTYDILTEKGRPPYNSRMSRVAKIEKTGERSVRFTFNEKSDREFPMLIAGSMPVLPKHAINRDTFGNSTLEPPIGSGPYVVASVQPGQRIVYKRNPDYWGKDLPSQRGFNNFDKISIEYYRNETSLFESFKKGILDIFIEGNPIRWEKLYDFPAVEQGKVIKDTFEKGTPADMLGFVFNTRRPIFADRRVRQALGLLFDFEWANSNLFAGQYRRTQSFWEGSQLSSVGRPADARERELLAPFPGAVREDVMNGTWHPPVTDGS---GHD-RVPAKKAYDLLSQAGFQFKDGMAIDPTAKPFAFEIMTRSPDEEKIALAYQRNLSRLGIAVEIHTVDDAQYQQRLQTFDYDMILGALASSLSPGNEQWLRWGSASRDVQGSFNFAGVADPAVDAMIEALLAARNRADFVSAVRALDRVLISGDYYVPLYHLPYQWVARWDRIEHPQKTPLSGYQLPAWWHTS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ONY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233054 for 4498 contacts (-51.8/contact) +
2D Compatibility (PS) -59683 + (NN) -34888 + (LL) 3708
1D Compatibility (HY) -36800 + (ID) 11300
Total energy: -372017.0 ( -82.71 by residue)
QMean score : 0.532
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