Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKQEYKQLPKRAEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCEKICTSNCIRIITHKGED------NRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSEFLTSEQDAKNCSHAEFLGFGAVSPNYNERMQATPLDYVQEPSKEESKEESPTSPESHKGDENV |
3IAS Chain:Y ((26-128)) | -----------------------------------------------------YPDAPVALKPRFHGRHVLTRH-PNGLEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDLVYGKEDMLVDVVGTKPQRREAKRTGKPVKVGYVVPYVRPELEGFKAPTEG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53377 for 584 contacts (-91.4/contact) +
2D Compatibility (PS) -10068 + (NN) -1839 + (LL) 4768
1D Compatibility (HY) -7200 + (ID) 1950
Total energy: -69666.0 ( -119.29 by residue)
QMean score : 0.485
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