Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMGLMNEEPKTPLLFISPGPGNPNSSGNLLKIIAMAKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNEEDKILAYQFHPESIMTLQGRALLEQSVGFLRELS
1I7Q Chain:D ((4-189))
--ILLLDNVDSFTYNLVDQLRASGHQVVIYRNQIGAEVIIERL-QHMEQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIGICLGHQAIVEAYGGQVGQAGEILHGKASAIAHDGEGMFAGMANPLPVARYHSLVGSNIPADLTVNARFGEMVMAVRDDRRRVCGFQFHPESILTTHGARLLEQTLAWALAK-
General information:
TITO was launched using:
RESULT:
Template:
1I7Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154665 for 1609 contacts (-96.1/contact) +
2D Compatibility (PS) -20217 + (NN) -9117 + (LL) 368
1D Compatibility (HY) -18800 + (ID) 3550
Total energy: -205981.0 ( -128.02 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1I7Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I7Q-query.scw
PDB file :
Tito_Scwrl_1I7Q.pdb
: