Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDFLKAFKDAFPHTISIFLGYLLMGMTFGMLLAQQGYDYKVALFMSLFIYAGAIQFVAITLLSAQASLMNVVIVSLLVNARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKKGVNETDFMFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIAIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC |
2LOR Chain:A ((59-82)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLQWSLLVAVVAGSVVSYGVTRVESE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15467 for 105 contacts (-147.3/contact) +
2D Compatibility (PS) -2770 + (NN) -5378 + (LL) 18272
1D Compatibility (HY) -800 + (ID) 200
Total energy: -6343.0 ( -60.41 by residue)
QMean score : 0.792
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