Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDH----SQRVSSVTKYWEDSSSVTINAFFTNQDENETFHMEMATFILSNNILFTIYYGTLEIFDSIQKKVLASPKKFEDGFDILTKIFEVYFEKGVECLEW-----INKQTSLLRKNIIFKET-------STHD-DILVRLSNLQEFNVALRDSFFDKRRIITALLRS--NKVDSDTKNNLNIILTDFSSLVESTTVNLNSLDNIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL |
4EV6 Chain:A ((46-339)) | -------------------------EDYRLIWIDCYDPKDEELYKLSKKIGISVSDLQIGLDEQEIPRVEED-EDFYLIIYKAPLFEEDITTT---SLGIYI-KNNLLLTIHSDKIKAIGRLHK--LISTKKPR-----------IVFERGIGFLLYHILNEITRSYSRILMNLEDELEELEDKLLAGYDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPITTKEDRENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMKILTMVTTIFAVPMWITGIYGMNFSYLPLANNPQGFWLVMALMVVIIMIFVYIFRRSGWI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77833 for 1799 contacts (-43.3/contact) +
2D Compatibility (PS) -29138 + (NN) -8033 + (LL) 3732
1D Compatibility (HY) -24400 + (ID) 3300
Total energy: -138972.0 ( -77.25 by residue)
QMean score : 0.355
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