Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLS--RGFLGSGVFTSVQKAYREVYRKDFDFSL
3ZOR Chain:A ((5-211))
--------LQDSWWNQLKEEFEKPYYQEL-REMLKREYAEQTIYPDSRDIFNALHYTSYDDVKVVILGQDPYHGP--------GQAQGLSFSVKPGVKQPPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRA-NAYLEKMGEAPIDWC
General information:
TITO was launched using:
RESULT:
Template:
3ZOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142885 for 1638 contacts (-87.2/contact) +
2D Compatibility (PS) -22318 + (NN) -12924 + (LL) 1620
1D Compatibility (HY) -16000 + (ID) 4700
Total energy: -197207.0 ( -120.39 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOR-query.scw
PDB file :
Tito_Scwrl_3ZOR.pdb
: