Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFD----------TGAKLIVLNHQSLLDIIYLEAYHPS-------NICWIAKKELGEIPFYGHALTDTGMILIDREDK------------KGIVSLLKACKEKL-DQNRPLVIFPEGTRGKGGEK------FLPFKQG----AKIIAEKFQLK--IQPMVLINSIKIFNSKPLEAYKARTRLVMLESYTPDF----------SSPTWYEELQERMQKEYLKHYHELNA |
| 1IUQ Chain:A ((96-347)) | ---------------------------------------IFGQNYIRPLIDFGN--SFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRP-DPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLC-HDIMPPP-RVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91876 for 1438 contacts (-63.9/contact) +
2D Compatibility (PS) -19738 + (NN) -1324 + (LL) 3084
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -115854.0 ( -80.57 by residue)
QMean score : 0.415
|
|
|