Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFLFEKSLMGFCAHSIKIIKVTGLILSFLAAFLVAEDTHEPEEIKAKVAYVKIPQLEDLENTPVYIGQTIGVTYDLLLFDAEFLEAKIKDGWDKTQIELLNKMPKWKKVEKELFRATYYYKIKGIRASIPSLEVSAFSNKDKYIDHSIAPKVALQVTDLSKNPRYANVMAKDLQVVQYKTKDYDDKNNILVMELAFKEANWEDFHVKEAIKQGFDNASLNQIKAKEGSVFYYCVLPKTLQNLSFDYFSLSNRQFKTLSFSAIPTQDTTGIQSDLIPKNNFLVFSNVALLALCVFFLALFFIFGRKLIFLGLGILCLGFVLYNLLFTQKSALLLAHKKIRILPTQ----------------NSTILGLSRDEMPIKILGSH--DDYYKILTPHEQIGWVKKDEVK |
| 3M1U Chain:A ((113-190)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQAWKGIVVSNSALREVPTLRPMFTAPTRAGQGYPFDMFQRTAVWMGTPVFVGHATADRAWLYVET-AFAAGWMPAADVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16780 for 400 contacts (-42.0/contact) +
2D Compatibility (PS) -6320 + (NN) 1981 + (LL) 25956
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 2837.0 ( 7.09 by residue)
QMean score : 0.287
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