Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDHLKHLQQLQNIERIVLSGIVLANHKIEEIHSVLEPSDFYYPPHGLFFEIALKLHEVNCPIDENFIRQKMPKDKQISEDDLVAIFAASPIDNIEAYVEEIKNASIKRKLFTLANTIREQALESAQKSSDILNAVEREVYALLNGSTIEGFRGIKEVLESTMNLITENQRKGSLKVTGIPTGFVQLDNYTSGFNQGSLVILGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQLALRALSDLTSINMHDLESARLDDDQWENLAKCFDHLSQKKLFFYDKSYVRMDQIRLQLRKLKSQHKELGIAFIDYLQLMSGNKATKERHEQIAEISRELKTLARELEIPIIALVQLNRSLENRDDKRPILSDIKDSGGIEQDADIVLFLYRGYIYQMRAEDNKIDKLKKEGKVEEAQELHLKVNEERRIHKQNGSIEEAEIIVAKNRNGATGTVYTRFNAPFTRYEDMPVDSHLEEGQETKFEMPTT |
| 4A1F Chain:A ((2-323)) | -------------------------------------------------------------------------------------------------------------------------------------------------------RNIKEVLESAMDLITENQRKGSLEVTGIPTGFVQLDNYTSGFNKGSLVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQLALRALSDLTSINMHDLESGRLDDDQWENLAKCFDHLSQKKLFFYDKSYVRIEQIRLQLRKLKSQHKELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIALVQLNRSLENRDDKRPILSDIKDSGGIEQDADIVLFLYRGYIYQMRAEDNKIDKLKKEGKIEEAQELYLKVNEERRIHKQNGSIEEAEIIVAKNRNGATGTVYTRFNAPFTRYEDMPIDSHL------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -146566 for 2501 contacts (-58.6/contact) +
2D Compatibility (PS) -35815 + (NN) -24585 + (LL) 13024
1D Compatibility (HY) -43200 + (ID) 15450
Total energy: -252592.0 ( -101.00 by residue)
QMean score : 0.599
|
|
|