Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAKPSKEVKTGDVISLHYLKGIEEYTILQIPTLKNVPRKDTHLYIAPKTKE
2K6P Chain:A ((1-84))
MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAKASKEVKAGDTISLHYLKGIEEYTILQIPALKNVPRKDTHLYIAPKTKE
General information:
TITO was launched using:
RESULT:
Template:
2K6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45817 for 548 contacts (-83.6/contact) +
2D Compatibility (PS) -8730 + (NN) 818 + (LL) 0
1D Compatibility (HY) -12000 + (ID) 4000
Total energy: -69729.0 ( -127.24 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2K6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K6P-query.scw
PDB file :
Tito_Scwrl_2K6P.pdb
: