Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPIKTYDIKEEELAKTAYATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGP---EHRIKCEVAHNPNKHQ-RGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAESLSVLDKIKQGDIIESVVFSPSL
2OK3 Chain:A ((2-137))
------------------SVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYS-EYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDG--LETLDELEKLPVNEKTYRPLND
General information:
TITO was launched using:
RESULT:
Template:
2OK3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67547 for 960 contacts (-70.4/contact) +
2D Compatibility (PS) -14215 + (NN) -7420 + (LL) 1748
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -99334.0 ( -103.47 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2OK3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OK3-query.scw
PDB file :
Tito_Scwrl_2OK3.pdb
: