Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLSGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFIASPAMGFTLITGILMLLIAPEMFKSGGWLHAKLALVVLLLIYHFYCKKCMRELEKDPTGKNARFYRVFNEIPTILMILIVILVVVKPF
3X0Y Chain:A ((73-121))
---------WPTAIEVVREIA--AADGSLGHLFGYHLTNAPMIELIG-SQEQEEHLYTQIAQNNWWTGNASSENNSHVLDWKVRATPTEDGGYVLNGTKHFCSGAKGSDLLFVFGVVQDDSPQQGAIIAAAIPTSRAGVTPNDDWAAI
General information:
TITO was launched using:
RESULT:
Template:
3X0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13768 for 247 contacts (-55.7/contact) +
2D Compatibility (PS) -5005 + (NN) -997 + (LL) 1376
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -21494.0 ( -87.02 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_3X0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3X0Y-query.scw
PDB file :
Tito_Scwrl_3X0Y.pdb
: