Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLVGLGNPTLRYDHTRHNAGFDILDSLVSELDLSFIFSPKHNAYL----CVYKDFILLKPQTYMNLSGESVLSAKNFYK--TKELLIVHDDLDLPLGVVKFKKGGGNGGHNGLKSIDALCSNSYYRLRVGI---SKGINITEHVLSKFHNNEEPLKNAAFEHAKNALKFFIESHDFNATQNRFTLKKPLQIES
4HOY Chain:A ((4-192))
ISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAM-NQINAYKPA----
General information:
TITO was launched using:
RESULT:
Template:
4HOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97652 for 1483 contacts (-65.8/contact) +
2D Compatibility (PS) -18665 + (NN) 198 + (LL) 724
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -131745.0 ( -88.84 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_4HOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HOY-query.scw
PDB file :
Tito_Scwrl_4HOY.pdb
: