Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIKKSELYSSLWAGADSLRGGMDASEYKNYVLNLLFLKYISDKAKNNM---------------------------------------------DSEIEVPQGCFYEDILALEG---DKEIGDKLNKIIAKIA-ERNDLKGVIDSVDFNDNTKLGEGKAMIDTLSNLVKIFADLSLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFYTPSEVSLLLSLLLGIDENTRQDKSIYDPTCGSGSLLLKASSLAG-------------KKGLTIYGQEKDISTTALCKMNMILHNSAT-ADIAKGGSSTLSNPLFTTENGMLKTFDYVVANPPFSLKNWTDGLSIDPKSKQVINDSFNRFE------DGTPPEKNGDFAFLLHIIKSLNPTGKGAVILPHGVLFRGN-AEAQIRKNLLMKGYIKGVIGLAPNLFYGTSIPACVIVLDKENAH------ARKGVFVIDASK-DFKKDGNKNRLREQDVQKMIDTFNALK-------EIPYYSKMVSLEEISLNDYNLNIPRYIAAKQELEKDLFALINSPSYLPKNEIKAYDPYFQVFKELKNTLFKKSDKEGYYALKTECENIKDLITQSLEYQTFHASVLSAFESLDLFTTFNDLEPGFNPKTLIESVCSKVLKEFEKVGILDKYGVYQLFKDYYNEVLQDDWFLISFNGFRSAKELRKLTPLKDKNKKANYLEEPDFIVQKTYYKSDLIPKHLIKQRFFEKETKELEELENALNEKEALLDEFIEEHSNEEGLFDGLKINESVLKKELKNATDLEDKQILKTALEWLEAKNKALKMKNKAYEELELKAFHQYKNLEINEIKDLIIKDKWLNSLKNALENKIQKRTNAFASALNEIISSYSNSLLELDKEVKESESKVLEHLKDLGLMG |
| 3KHK Chain:A ((7-530)) | -QQFLNDLDNQLWRAADKLRSNLDAANYKHVVLGLIFLKYVSDAFEERQQELTELFQKDDDDNIYYLPREDYDSDEAYQQAIAEELEIGDYYTEKNVFWVPKTARWNKLRDVITLPT--SVSWLIDNAFDDIEKANPKLKGILNRISQYQ--------LDADKLIGLINEF-----------SKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEP----YK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNA--DSFLDDQH-----PDLRADFVMTNPPFNMKDWWHEKL----------ADDPRWTINTNKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKNAKNGKRDRRGQVLFIDARKLGYMKDRVLRDFKDEDIQKLADTFHNWQQEWSEENNQAGFCFSADLALIRKNDFVLTPGRYVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207067 for 3393 contacts (-61.0/contact) +
2D Compatibility (PS) -44141 + (NN) -30262 + (LL) 28824
1D Compatibility (HY) -31200 + (ID) 6200
Total energy: -290046.0 ( -85.48 by residue)
QMean score : 0.554
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