Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALKKVNKEEEWKKLVKRFDVNYQFIPIIKNMLIGASVPQEFLF-LAMAESKFSSRAYSRKKAVGIWQFMPSTAKE----LGLKVNHYIDERRDPIKSTQAAIAYLKRLYKQT-GEWYLVAMAYNYGLRKVQNAIKAAG-TSDIKVLLDEDKKYLP-KETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPTNKKLLATREF |
| 1QSA Chain:A ((449-600)) | ----------------------------------------------------------------------------FPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVA----FVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87116 for 1111 contacts (-78.4/contact) +
2D Compatibility (PS) -15570 + (NN) -4674 + (LL) 16332
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -97478.0 ( -87.74 by residue)
QMean score : 0.501
|
|
|