Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKLIQFLFIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKTKLINAIHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIHIQYYIFKTDAISTEIRDILVEKAKSGVEVRFMFDGLGSSKLGKAFLAPLKEAGVSIHAFDPIASPWIVRTANLRNHRKIVVIDGQIGFTGGLNI-GEEYRSNTPDFRVWRDTHIKITGQAVIELQESFLNDWVYMENQAGAADGFISESGSKQYFSP-----------VDMGDEWAQVIYG-------------------------------------GPYDKEKWVRDSMLDLIDSAKESVWIV--------SPYFVPDEESLAVIRRVAMSGVDVRVIIPGKGDRGISFHGSNAYVKTMIEAGAKMYAYADDSF----------------------------VHAKAMLVDGTRAAIGTANFDVRSFRLNHELMVFLYDESEAMHHLKRDFKKDFEDSRLFTMKDMENKPLLTRIKEVLSSLLSPIL |
| 1F0I Chain:A ((1-504)) | -AATPHLDAVEQTLRQVSPGLEGD---VWERTSG-------------------NKLDGSAADPSDWLLQTPGC-----WGDDKCADRVGTKRLLAKMTENIG--------------NATRTVDISTLAP--------FPNG-AFQDAIVAGLKESAAKGN-----------SLKVRILVGAAPHMNGIPSKYRDKL-TAKLG------KAAENITLNVASMTTS----KTAFSWNHSKILVVDGQSALTGGINSWKDDYLDTTHPVS---DVDLALTGPAAGSAGRYLDTLWTWTCKNKSNIASVWFAASGNAGCMPTMHKDTNPKASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEESALRALVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPANRGYSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPNGKWADGHPYAQHHKLVSVDSSTFYIGSKNLYPS---WLQDFGYIVESPEAAKQLDAKLLDPQWKYSQETATVDYARGICGA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139255 for 3570 contacts (-39.0/contact) +
2D Compatibility (PS) -44785 + (NN) -17956 + (LL) 9036
1D Compatibility (HY) 800 + (ID) 3850
Total energy: -196010.0 ( -54.90 by residue)
QMean score : 0.376
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