Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHK-------SNPNYGFVGNPFSK--SGWTIYPPALVNQVKKY-TGSAKNMTGTNLAGIKNQLNKKRPVVAWVSKFH---------------------GFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY |
| 3ERV Chain:A ((31-223)) | --------------------------------------------------------------------------------------------------------------KVILSNVPFIQQLPELDRGCEVTSLAMMLQYAGITVDKMKLANEIKKVDFMNDGVRGNPNEGFVGNIYTFSESGYGVYHGPLFQLAKKYLPNKAVDLTGKSIEELYKSVKAGQPVVIITN-ATFAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQESVYIRDPLKDSLDVKVPREKFEQAWVQMGSQAISY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ERV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77723 for 1332 contacts (-58.4/contact) +
2D Compatibility (PS) -17493 + (NN) -9120 + (LL) 6280
1D Compatibility (HY) -14800 + (ID) 3000
Total energy: -115856.0 ( -86.98 by residue)
QMean score : 0.584
|
|
|