Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDYIIAAHGRYAQEVKDSCQMITGQTTNISAITFTEEMGVTDVLDAYMAVYSPVNE---TAIIVDIVGGTPCNAAQMFSTK-----HPEVKVVSGLSLGLIIPLSLGESLEEAMLGAKDNIQFVEQKASHTIVSDDGEEED
3IPR Chain:A ((2-112))
LGIVIATHGALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSGTNLPMVL-----EAINHQLLG-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98740 for 780 contacts (-126.6/contact) +
2D Compatibility (PS) -11070 + (NN) -215 + (LL) 1492
1D Compatibility (HY) -10400 + (ID) 1350
Total energy: -120283.0 ( -154.21 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_3IPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IPR-query.scw
PDB file :
Tito_Scwrl_3IPR.pdb
: