Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILKEVCIENTTNLVNVIEAGANRVELCDNLAEGGTSVSYGVAKHVVKICHEQNVSVMAMVRPRKGNFVYTKEEISVMIDDILMYKKIAVDGVVFGCITDSGLLDKPAINELLKAAAGLEVTFHMAFDELVETEKLSAIDWLVEQGVTRILTHGGDGAKLPEETFVQWRKYIDYAAGRIIILPGGGIKSHNLEWIIKETGAAEIHGTDLFGER
3IWP Chain:A ((25-228))
GFLMEVCVDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQS---VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVH--DPMAALETLLTLGFERVLTSGCDS--SALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILEGSGATEFHCSARST--
General information:
TITO was launched using:
RESULT:
Template:
3IWP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163240 for 1721 contacts (-94.9/contact) +
2D Compatibility (PS) -22374 + (NN) -11809 + (LL) 772
1D Compatibility (HY) -15200 + (ID) 4000
Total energy: -215851.0 ( -125.42 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_3IWP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IWP-query.scw
PDB file :
Tito_Scwrl_3IWP.pdb
: