Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEESFFFYMLTI---GSLVLSGVGLA---GSFIVSHKPRLGGAMMVAAAIGCTMSI-----SIMFLLPIVLLAVGGLIALINYEEAASVEE----------
4Q7O Chain:A ((4-136))
MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPINLAYHYFNIAISDFLIAHPEYQKKCKEIQKTY
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117028 for 803 contacts (-145.7/contact) +
2D Compatibility (PS) -12038 + (NN) -4159 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -139675.0 ( -173.94 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: