Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPTMMTYINEEEEMCRAILANFQTNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENIADVRITVEEPFNHLYYEKLSNHLDLVIGISQSGQSTSTISALERVKKE-ASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTAQIDETKFNNEINAFSRATNAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETESAVTERLVALRNYESKYTPFTYTVKFGTAGNDRTLLIPADLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDFGVAMKSKTKPGDYA |
| 2AML Chain:A ((13-373)) | MKPTMMTYINEEEEMCRVILADFQTNAEKLESLVKNGAKEWLILATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYYEKLSSHLDLVIGISQSGQSTSTISALERVK-KEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTVQIDETRFNNEISAFSRAIDAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETASAVTERLVLLRDYESKYTPFTYTVKFGKGEDDRTLVIPTDLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDFGVAMKSKTKPGDYA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199869 for 3216 contacts (-62.1/contact) +
2D Compatibility (PS) -38650 + (NN) -16514 + (LL) 64
1D Compatibility (HY) -48800 + (ID) 17000
Total energy: -320769.0 ( -99.74 by residue)
QMean score : ?
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