Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFYEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAECFVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIESVRVLEPSKIKKITKKLVNKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYRQAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNMSDINLYIFTDEIEMNNLDITSRISTIAIMELILYQFMEDETSSF---------------- |
| 4IVN Chain:A ((6-278)) | -NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYKGYSDFRMALAVDLSQTGD--------ICDVSAQSAVDSLQDTAKLIDRKSLARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGDLWFAVSSSGSTKEVIHAAGLAYKRDIP--VVSLTNINHSPLSSLSTEMLVAARPEGPLTGGAFASKVGALLLVDVLVNSLLESYPEYKDSVQETAEVVIPLMAN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144320 for 2089 contacts (-69.1/contact) +
2D Compatibility (PS) -27019 + (NN) -10621 + (LL) 724
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -193686.0 ( -92.72 by residue)
QMean score : 0.591
|
|
|