Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFYEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAECFVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIESVRVLEPSKIKKITKKLVNKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYRQAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNMSDINLYIFTDEIEMNNLDITSRISTIAIMELILYQFMEDETSSF----------------
4IVN Chain:A ((6-278))-NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYKGYSDFRMALAVDLSQTGD--------ICDVSAQSAVDSLQDTAKLIDRKSLARIVERVHQAEFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGDLWFAVSSSGSTKEVIHAAGLAYKRDIP--VVSLTNINHSPLSSLSTEMLVAARPEGPLTGGAFASKVGALLLVDVLVNSLLESYPEYKDSVQETAEVVIPLMAN


General information:
TITO was launched using:
RESULT:

Template: 4IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144320 for 2089 contacts (-69.1/contact) +
2D Compatibility (PS) -27019 + (NN) -10621 + (LL) 724
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -193686.0 ( -92.72 by residue)
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_4IVN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IVN-query.scw
PDB file : Tito_Scwrl_4IVN.pdb: