Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------VDFITYIIDFILHI-DQHLVEIINNFGIWTYIILFLIVFIETGLVVFPFLPGDSLLFAAGALSVLDGSILHIVPLIIT-------LWLAAVLGDTVNYHIGKKIGTSIPEDSW---------------FGKLINKEKMEKAEAFFN--KHGGKTIFIARFMP-------------FIRTFAPFVAGASRMNYRYFLNYNILGATVWV-LLCTLAGYFFGNFP------IVKDNFSLVVIGIIVVSVI-----PMVVSFIKSKMDKKSAE |
| 3H2U Chain:B ((39-317)) | LDPEEIRKRLEHTERQFRNRRKILIRGLPGDVTNQEVHDLLSDYE-----LKYCFVDKYKGTAFVTL---LNGEQAEAAINAFHQSRLRERELSVQLQPTDALLCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRCLCVDRLPPGFNDVDALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRVSFCAPGPPGRSMLAALIAAQATA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208230 for 1470 contacts (-141.7/contact) +
2D Compatibility (PS) -23020 + (NN) -1664 + (LL) 572
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -234292.0 ( -159.38 by residue)
QMean score : 0.226
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