Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------LSNFTAKVPLSERMADVLISK------DRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPL-------------IGEEHRKTLKRKAMIGTLIL------TGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE |
| 4OO1 Chain:H ((9-361)) | ITITKRNGAFSDSQIVTPGELVTDDPIWMRGHGTYFLDNMTYSSVAGTVSRVNRLLSVIPLKGRYAPETGDHVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPGQMRSFLKEGDLLNAEVQSLFQDGSASLHTRSLKYGKLRNGMFCQ--VPSSLIVRAKNHTHNLPGNITVVLGVNGYIWLRKTSQMDLARDTPSANSWQIYSDENDPSISNNIRQAICRYANVIKALAFCEIGITQQRIVSAYEASMVYSNVGELIEKNVMESIGSDILTAEKMRGN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117871 for 1425 contacts (-82.7/contact) +
2D Compatibility (PS) -20351 + (NN) 4031 + (LL) 488
1D Compatibility (HY) 800 + (ID) 1700
Total energy: -134603.0 ( -94.46 by residue)
QMean score : 0.217
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