Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------LSNFTAKVPLSERMADVLISK------DRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPL-------------IGEEHRKTLKRKAMIGTLIL------TGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE
4OO1 Chain:H ((9-361))ITITKRNGAFSDSQIVTPGELVTDDPIWMRGHGTYFLDNMTYSSVAGTVSRVNRLLSVIPLKGRYAPETGDHVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPGQMRSFLKEGDLLNAEVQSLFQDGSASLHTRSLKYGKLRNGMFCQ--VPSSLIVRAKNHTHNLPGNITVVLGVNGYIWLRKTSQMDLARDTPSANSWQIYSDENDPSISNNIRQAICRYANVIKALAFCEIGITQQRIVSAYEASMVYSNVGELIEKNVMESIGSDILTAEKMRGN---


General information:
TITO was launched using:
RESULT:

Template: 4OO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117871 for 1425 contacts (-82.7/contact) +
2D Compatibility (PS) -20351 + (NN) 4031 + (LL) 488
1D Compatibility (HY) 800 + (ID) 1700
Total energy: -134603.0 ( -94.46 by residue)
QMean score : 0.217

(partial model without unconserved sides chains):
PDB file : Tito_4OO1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OO1-query.scw
PDB file : Tito_Scwrl_4OO1.pdb: