Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFVKMQEKNENK
2YH5 Chain:A ((25-59))
------VVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLS------------
General information:
TITO was launched using:
RESULT:
Template:
2YH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9364 for 163 contacts (-57.4/contact) +
2D Compatibility (PS) -3841 + (NN) -374 + (LL) 1136
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -14293.0 ( -87.69 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_2YH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YH5-query.scw
PDB file :
Tito_Scwrl_2YH5.pdb
: