Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQ----SDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLD----SATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSR-TFDAASYLRSLGADTILVQQFLKEDI-----TTFTQ-RSRL----VESLEIYHD---GMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPD--KLIGISARSLGQINV-QVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET |
| 3W5W Chain:A ((4-337)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVIAQAHIDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIV-PNAF-PDFLKWMPGSKD---ILLYDRYQEFADKLIMEADVICCLDFNALKRI--DEMSDIVAASPGRKIMIDHHLYPEDFCR---ITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGID--------KDDIYRKVYNTYSESRLRLMGYVLSNMKVYKDYNSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE-MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYG-TMEEAVKVFEQALEKY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148352 for 2513 contacts (-59.0/contact) +
2D Compatibility (PS) -32849 + (NN) -8185 + (LL) 28324
1D Compatibility (HY) -20000 + (ID) 4450
Total energy: -185512.0 ( -73.82 by residue)
QMean score : 0.441
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