Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQ----SDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLD----SATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSR-TFDAASYLRSLGADTILVQQFLKEDI-----TTFTQ-RSRL----VESLEIYHD---GMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPD--KLIGISARSLGQINV-QVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET
3W5W Chain:A ((4-337))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVIAQAHIDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIV-PNAF-PDFLKWMPGSKD---ILLYDRYQEFADKLIMEADVICCLDFNALKRI--DEMSDIVAASPGRKIMIDHHLYPEDFCR---ITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGID--------KDDIYRKVYNTYSESRLRLMGYVLSNMKVYKDYNSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE-MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYG-TMEEAVKVFEQALEKY-----


General information:
TITO was launched using:
RESULT:

Template: 3W5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148352 for 2513 contacts (-59.0/contact) +
2D Compatibility (PS) -32849 + (NN) -8185 + (LL) 28324
1D Compatibility (HY) -20000 + (ID) 4450
Total energy: -185512.0 ( -73.82 by residue)
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_3W5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W5W-query.scw
PDB file : Tito_Scwrl_3W5W.pdb: