Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVETIDVFSPVELYLLLSPIEAQHLFGVPDKLTFL-LKGEDVFAEGFDRLKSKGILNEAG---ELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLVMIEITPQKEYRFERMNKIYALEMIKDFFPLIRREPGERETEFLKEELTNEERKRATAFDPEKNFISMEFFHVDEEPKEKNNAKYYKQYLAFEMEDKLMMVDVVNDTYYRGSQYALLKLLFDELEFPYEEAK |
1BJA Chain:A ((12-87)) | ------DVLNEKTATILITIAKKDF-ITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSGDGLIITGEAQDIISNAATLYAQ---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30438 for 457 contacts (-66.6/contact) +
2D Compatibility (PS) -7274 + (NN) 410 + (LL) 14472
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -26230.0 ( -57.40 by residue)
QMean score : 0.461
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